Release Notes 2.22 (August 2024)
Capsule & Pipeline Materialization
Code Ocean is taking reproducibility to the next level with materialization of all Capsule and Pipeline components required for a run into json files in a new core folder, /.codeocean, that can be tracked by git. Files in this folder expose and track:
The Starter Environment of the Capsule
The EC2 compute instance that Capsule is running on
Data Assets attached to the Capsule or Pipeline
App Panel representation
The Pipeline logical representation to generate the Nextflow script
The Pipeline layout, including the position of Capsules and connections in the Pipeline Editor
The Pipeline Settings, such as the Nextflow version, instance type, etc.
Data Details Added to File Browser
Data Details can be opened by clicking option in the drop-down menu next to the Data Asset.
Import Result from External Computation
As the next phase of Code Ocean's support for running computations using external and on-prem resources, Code Ocean Capsules and Pipelines can be exported and run outside of Code Ocean and imported back into Code Ocean through the API. Now, these results will be tracked with provenance and shown on the lineage graph.
Admin Dashboard v3.0
The Admin Dashboard has been updated with new charts, each with a search box and direct link to each of the Data Assets and Capsules referenced in the tables. In addition, the User Activity Chart now lists the group to which users belong. There is now a Pipelines tab that separates Pipelines from Capsules to track Pipeline usage and the cost of the Pipeline's head node. Upcoming versions will track the cost of the entire Pipeline run.
Cross Account + Cross Region Deployment Migration and Backup
As of Code Ocean v2.19, it is possible to configure automated backups or migrate a Code Ocean deployment to a different AWS account or region. As of Code Ocean v2.22, it is now possible to configure automated backups or migrate a Code Ocean deployment to a different AWS account and a different region.
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