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Release Notes 3.5 (April 2025)

Pipeline Monitoring - Extended Features

We've added two new features to enhance Pipeline monitoring:

  • GPU Request Visibility: The number of GPUs requested is now displayed in the resource summary at the run, process, and task levels (when applicable), providing a clearer view of resource allocation during Pipeline runs.

  • Download Button for Task Files: Users can now download task files directly from the Task Details panel, improving accessibility and simplifying data review.

Pipelines - DSL2 Migration

Code Ocean Pipelines now fully support Nextflow DSL2, bringing compatibility with the latest workflow standards. All newly created Pipelines will use DSL2 by default, and existing Pipelines can be optionally migrated to DSL2 with a single click in the Pipeline Settings UI.

This update aligns with Nextflow's deprecation of DSL1, while allowing users to migrate existing Pipelines at their own pace.

Pipeline Settings Menu

Cost Monitoring - Computation Cost added for Capsules

The run actions menu has been updated with a more intuitive layout and Estimated Cost has been added for Capsule runs. This makes it easier for users to access key information and actions, and stay informed about resource usage.

Timeline Run Menu

Admin - Block Data Downloads

For organizations that require tighter data control, we are introducing a new Download Settings page in the Admin Panel. This feature allows admins to block downloads of Data Assets and run output files via both the Code Ocean UI and public APIs–supporting stricter compliance and security requirements.

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