Title | Input Data | |
---|---|---|
Wally visualizations
Genome fasta reference and fai file
.bam files
Dose response
.csv file containing gene expression and treatment dosage (see README for details)
DESeq2
Input varies depending on the source (i.e., Seurat vs RSEM) see README for details.
Mol* Viewer for PDB Files
Protein structure files in .pdb format
TensorBoard GPU
None
RShiny Cell
Single cell .rds inputs from Seurat (see README)
1-3. Single Cell Analysis Tutorial (Scanpy & Seurat)
Tutorial datasets (see README for details)
5-6. Single Cell Analysis Tutorial (Scanpy)
Tutorial datasets (see README for details)
7-10. Single Cell Analysis Tutorial (Scanpy) Advanced
Tutorial datasets (see README for details)
MLflow Orchestrator Capsule
None