nf-core Pipelines

nf-core is a community effort to collect a curated set of analysis pipelines built using Nextflow. It provides portable, documented, automated pipelines that guarantee reproducibility. These pipelines can be accessed in Code Ocean through a single button import function. This provides easy access to 100 standardized and customizable workflows, which can greatly reduce the time to perform new analyses.

This section covers how to Import nf-core pipelines and go through an nf-core RNAseq tutorial.